• Bug#1103367: mdanalysis: FTBFS in testing/armhf: E: Build killed with s

    From Lucas Nussbaum@21:1/5 to All on Wed Apr 16 21:20:02 2025
    Source: mdanalysis
    Version: 2.9.0-1
    Severity: serious
    Justification: FTBFS
    Tags: trixie sid ftbfs
    User: lucas@debian.org
    Usertags: ftbfs-20250416 ftbfs-trixie

    Hi,

    During a rebuild of all packages in testing (trixie), your package failed
    to build on armhf.


    Relevant part (hopefully):
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box2] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-None] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box1] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box2] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-None] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box1] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box2] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-None] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box1] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box2] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-None] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box1] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box2] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-serial] PASSED [ 43%]
    testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-openmp]
    E: Build killed with signal TERM after 150 minutes of inactivity


    The full build log is available from: http://qa-logs.debian.net/2025/04/16/mdanalysis_2.9.0-1_testing-armhf.log

    All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20250416;users=lucas@debian.org
    or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20250416&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

    A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

    If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects

    If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)